STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1794Periplasmic substrate-binding protein. (155 aa)    
Predicted Functional Partners:
CPM_1793
NitT family ABC transporter permease.
 
   
 0.834
CPM_1792
NitT family ABC transporter ATPase.
 
     0.760
CPM_1796
U-APC1 family APC superfamily transporter.
 
     0.618
CPM_1795
Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase.
 
     0.592
CPM_0371
Glycosyltransferase.
  
     0.505
CPM_0255
Major facilitator superfamily permease.
  
     0.484
CPM_0958
Mevalonate pyrophosphate decarboxylase.
  
     0.461
CPM_0780
Glycosyltransferase.
  
     0.419
CPM_0617
U-APC2 family APC superfamily transporter.
  
     0.411
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.