STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1796U-APC1 family APC superfamily transporter. (606 aa)    
Predicted Functional Partners:
CPM_0622
Cationic amino acid transporter.
  
     0.630
CPM_1794
Periplasmic substrate-binding protein.
 
     0.618
CPM_1797
Short-chain dehydrogenase/reductase SDR.
   
   0.609
CPM_1795
Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase.
 
    0.588
CPM_1614
Glycosidase.
  
 0.580
CPM_1880
Maltose alpha-D-glucosyltransferase/alpha-amylase.
  
 0.580
CPM_1881
1,4-alpha-glucan branching enzyme.
  
 0.580
CPM_0086
DHA3 family major facilitator superfamily permease.
  
   0.570
CPM_0917
DHA1 family major facilitator superfamily permease.
  
     0.568
CPM_1101
Fsr family major facilitator superfamily permease.
  
   0.567
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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