STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1827Gld family ABC transporter permease. (491 aa)    
Predicted Functional Partners:
CPM_1828
ABC2-1 family ABC transporter permease.
      
0.773
CPM_1829
Gld family ABC transporter ATPase.
       0.773
CPM_1830
G1 family peptidase.
       0.567
CPM_1824
ArsB family efflux pump permease.
       0.508
CPM_1825
Protein-tyrosine-phosphatase.
       0.508
CPM_1826
ArsR family transcriptional regulator.
       0.508
CPM_1823
4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.417
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.