STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900178525_00630Unannotated protein. (642 aa)    
Predicted Functional Partners:
GCA_900178525_00631
Unannotated protein.
       0.788
GCA_900178525_00632
Unannotated protein.
       0.788
GCA_900178525_00633
Unannotated protein.
       0.779
GCA_900178525_02905
Unannotated protein.
   
 
 0.709
GCA_900178525_02159
Unannotated protein.
   
   0.559
GCA_900178525_00068
Unannotated protein.
   
   0.523
GCA_900178525_00111
Unannotated protein.
   
   0.523
GCA_900178525_00691
Unannotated protein.
   
   0.523
GCA_900178525_02371
Unannotated protein.
   
   0.523
GCA_900178525_00574
Unannotated protein.
    
  0.496
Your Current Organism:
Massilibacteroides vaginae
NCBI taxonomy Id: 1673718
Other names: CSUR P1477, DSM 100704, M. vaginae, Massilibacteroides vaginae Jneid et al. 2018, Porphyromonadaceae bacterium MV12, strain MV12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.