STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900178525_00696Unannotated protein. (587 aa)    
Predicted Functional Partners:
GCA_900178525_00695
Unannotated protein.
 
     0.940
GCA_900178525_01505
Unannotated protein.
  
 
   0.815
GCA_900178525_00402
Unannotated protein.
  
 
   0.775
GCA_900178525_02347
Unannotated protein.
  
 
   0.768
GCA_900178525_00138
Unannotated protein.
  
     0.755
GCA_900178525_01607
Unannotated protein.
  
 
   0.745
GCA_900178525_00742
Unannotated protein.
  
 
   0.725
GCA_900178525_01506
Unannotated protein.
  
     0.717
GCA_900178525_02730
Unannotated protein.
  
     0.715
GCA_900178525_01530
Unannotated protein.
  
     0.709
Your Current Organism:
Massilibacteroides vaginae
NCBI taxonomy Id: 1673718
Other names: CSUR P1477, DSM 100704, M. vaginae, Massilibacteroides vaginae Jneid et al. 2018, Porphyromonadaceae bacterium MV12, strain MV12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.