STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900178525_01335Unannotated protein. (209 aa)    
Predicted Functional Partners:
GCA_900178525_01337
Unannotated protein.
 
     0.951
GCA_900178525_01339
Unannotated protein.
 
    0.950
GCA_900178525_01344
Unannotated protein.
 
    0.948
GCA_900178525_01345
Unannotated protein.
 
    0.947
GCA_900178525_01342
Unannotated protein.
 
     0.946
GCA_900178525_01340
Unannotated protein.
 
     0.943
GCA_900178525_01343
Unannotated protein.
 
     0.940
GCA_900178525_01341
Unannotated protein.
 
     0.921
GCA_900178525_01346
Unannotated protein.
 
     0.916
GCA_900178525_01338
Unannotated protein.
 
     0.915
Your Current Organism:
Massilibacteroides vaginae
NCBI taxonomy Id: 1673718
Other names: CSUR P1477, DSM 100704, M. vaginae, Massilibacteroides vaginae Jneid et al. 2018, Porphyromonadaceae bacterium MV12, strain MV12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.