STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900178525_01912Unannotated protein. (250 aa)    
Predicted Functional Partners:
GCA_900178525_01913
Unannotated protein.
 
   
 0.879
GCA_900178525_01910
Unannotated protein.
 
     0.867
GCA_900178525_02283
Unannotated protein.
    
  0.839
GCA_900178525_01914
Unannotated protein.
 
     0.757
GCA_900178525_00353
Unannotated protein.
  
     0.751
GCA_900178525_01917
Unannotated protein.
 
     0.735
GCA_900178525_01911
Unannotated protein.
  
    0.717
GCA_900178525_01915
Unannotated protein.
 
     0.685
GCA_900178525_01916
Unannotated protein.
 
  
 0.677
GCA_900178525_01918
Unannotated protein.
 
     0.616
Your Current Organism:
Massilibacteroides vaginae
NCBI taxonomy Id: 1673718
Other names: CSUR P1477, DSM 100704, M. vaginae, Massilibacteroides vaginae Jneid et al. 2018, Porphyromonadaceae bacterium MV12, strain MV12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.