STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900178525_01923Unannotated protein. (477 aa)    
Predicted Functional Partners:
GCA_900178525_02682
Unannotated protein.
  
 
 0.759
GCA_900178525_00148
Unannotated protein.
  
  0.738
GCA_900178525_01608
Unannotated protein.
    
 0.705
GCA_900178525_00097
Unannotated protein.
    
 0.699
GCA_900178525_01924
Unannotated protein.
       0.668
GCA_900178525_00548
Unannotated protein.
    
  0.633
GCA_900178525_00576
Unannotated protein.
  
 
  0.562
GCA_900178525_01689
Unannotated protein.
    
  0.539
GCA_900178525_00519
Unannotated protein.
 
     0.514
GCA_900178525_00817
Unannotated protein.
  
 
  0.498
Your Current Organism:
Massilibacteroides vaginae
NCBI taxonomy Id: 1673718
Other names: CSUR P1477, DSM 100704, M. vaginae, Massilibacteroides vaginae Jneid et al. 2018, Porphyromonadaceae bacterium MV12, strain MV12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.