STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900178525_02609Unannotated protein. (407 aa)    
Predicted Functional Partners:
GCA_900178525_02610
Unannotated protein.
     
 0.754
GCA_900178525_02611
Unannotated protein.
       0.746
GCA_900178525_00798
Unannotated protein.
 
  
 0.671
GCA_900178525_01602
Unannotated protein.
  
     0.585
GCA_900178525_02608
Unannotated protein.
       0.527
GCA_900178525_02613
Unannotated protein.
       0.501
GCA_900178525_02607
Unannotated protein.
  
    0.410
GCA_900178525_02605
Unannotated protein.
       0.405
GCA_900178525_02606
Unannotated protein.
       0.405
Your Current Organism:
Massilibacteroides vaginae
NCBI taxonomy Id: 1673718
Other names: CSUR P1477, DSM 100704, M. vaginae, Massilibacteroides vaginae Jneid et al. 2018, Porphyromonadaceae bacterium MV12, strain MV12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.