STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900059565_01317Unannotated protein. (149 aa)    
Predicted Functional Partners:
GCA_900059565_01320
Unannotated protein.
 
    0.880
GCA_900059565_01319
Unannotated protein.
 
     0.860
GCA_900059565_01324
Unannotated protein.
 
    0.822
GCA_900059565_01315
Unannotated protein.
 
     0.801
GCA_900059565_01316
Unannotated protein.
       0.769
GCA_900059565_01312
Unannotated protein.
       0.768
GCA_900059565_01313
Unannotated protein.
       0.768
GCA_900059565_01314
Unannotated protein.
       0.768
GCA_900059565_01318
Unannotated protein.
 
    
0.533
GCA_900059565_00374
Unannotated protein.
 
    0.420
Your Current Organism:
Murdochiella massiliensis
NCBI taxonomy Id: 1673723
Other names: CSUR P1987, M. massiliensis, Murdochiella sp. SIT12, strain SIT12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.