STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900059565_01359Unannotated protein. (374 aa)    
Predicted Functional Partners:
GCA_900059565_01356
Unannotated protein.
 
 
 0.966
GCA_900059565_01361
Unannotated protein.
 
 
 0.937
GCA_900059565_00273
Unannotated protein.
  
 0.922
GCA_900059565_00051
Unannotated protein.
  
 
 0.903
GCA_900059565_01363
Unannotated protein.
 
 
 0.895
GCA_900059565_01360
Unannotated protein.
 
 
 0.848
GCA_900059565_01358
Unannotated protein.
 
  
 0.847
GCA_900059565_01357
Unannotated protein.
 
  
 0.821
GCA_900059565_00533
Unannotated protein.
  
    0.786
GCA_900059565_00060
Unannotated protein.
    
  0.754
Your Current Organism:
Murdochiella massiliensis
NCBI taxonomy Id: 1673723
Other names: CSUR P1987, M. massiliensis, Murdochiella sp. SIT12, strain SIT12
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