STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001299475_00064Unannotated protein. (336 aa)    
Predicted Functional Partners:
GCA_001299475_00759
Unannotated protein.
 
 
 
 0.822
GCA_001299475_00065
Unannotated protein.
 
     0.816
GCA_001299475_00063
Unannotated protein.
       0.727
GCA_001299475_00068
Unannotated protein.
 
     0.693
GCA_001299475_00066
Unannotated protein.
       0.580
GCA_001299475_00067
Unannotated protein.
       0.442
Your Current Organism:
Neofamilia massiliensis
NCBI taxonomy Id: 1673724
Other names: Clostridiales bacterium SIT13, DSM 100639, N. massiliensis, strain SIT13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.