STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001602705_00486Unannotated protein. (190 aa)    
Predicted Functional Partners:
GCA_001602705_00264
Unannotated protein.
      0.707
GCA_001602705_02038
Unannotated protein.
 
      0.630
GCA_001602705_00485
Unannotated protein.
       0.610
GCA_001602705_00487
Unannotated protein.
       0.558
GCA_001602705_02008
Unannotated protein.
    
   0.495
GCA_001602705_02497
Unannotated protein.
  
 
 0.465
GCA_001602705_02107
Unannotated protein.
 
    
0.439
GCA_001602705_00483
Unannotated protein.
       0.429
GCA_001602705_00484
Unannotated protein.
       0.429
Your Current Organism:
Actinomycetales bacterium Actino01
NCBI taxonomy Id: 1674805
Other names: A. bacterium Actino_01, Actinomycetales bacterium Actino_01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.