STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001602705_00852Unannotated protein. (1187 aa)    
Predicted Functional Partners:
GCA_001602705_02127
Unannotated protein.
 
 
 0.992
GCA_001602705_02126
Unannotated protein.
 
 
 
 0.944
GCA_001602705_02635
Unannotated protein.
    
  0.886
GCA_001602705_00855
Unannotated protein.
   0.759
GCA_001602705_02469
Unannotated protein.
   
 
 0.750
GCA_001602705_01979
Unannotated protein.
  
  0.720
GCA_001602705_02335
Unannotated protein.
  
  0.720
GCA_001602705_02352
Unannotated protein.
   
 
  0.713
GCA_001602705_01316
Unannotated protein.
    
 
 0.690
GCA_001602705_03211
Unannotated protein.
    
 0.661
Your Current Organism:
Actinomycetales bacterium Actino01
NCBI taxonomy Id: 1674805
Other names: A. bacterium Actino_01, Actinomycetales bacterium Actino_01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.