STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001602705_00954Unannotated protein. (84 aa)    
Predicted Functional Partners:
GCA_001602705_00947
Unannotated protein.
   
 
 0.840
GCA_001602705_02613
Unannotated protein.
  
 
 
 0.830
GCA_001602705_02612
Unannotated protein.
    
 
 0.805
GCA_001602705_02621
Unannotated protein.
   
 
 0.803
GCA_001602705_02142
Unannotated protein.
  
   
 0.766
GCA_001602705_02608
Unannotated protein.
  
   
 0.740
GCA_001602705_02609
Unannotated protein.
  
     0.682
GCA_001602705_02091
Unannotated protein.
  
   
 0.651
GCA_001602705_00951
Unannotated protein.
 
     0.593
GCA_001602705_02050
Unannotated protein.
  
     0.593
Your Current Organism:
Actinomycetales bacterium Actino01
NCBI taxonomy Id: 1674805
Other names: A. bacterium Actino_01, Actinomycetales bacterium Actino_01
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.