STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001603005_00216Unannotated protein. (787 aa)    
Predicted Functional Partners:
GCA_001603005_00577
Unannotated protein.
   
 
 0.932
GCA_001603005_01191
Unannotated protein.
   
 
 0.932
GCA_001603005_01510
Unannotated protein.
   
 
 0.932
GCA_001603005_01794
Unannotated protein.
   
 
 0.932
GCA_001603005_00107
Unannotated protein.
  
 
 0.863
GCA_001603005_02006
Unannotated protein.
    
  0.790
GCA_001603005_00792
Unannotated protein.
    
  0.784
GCA_001603005_02440
Unannotated protein.
  
  
  0.724
GCA_001603005_01117
Unannotated protein.
  
     0.661
GCA_001603005_02541
Unannotated protein.
   
 0.648
Your Current Organism:
Clostridiales bacterium Firm04
NCBI taxonomy Id: 1674842
Other names: C. bacterium Firm_04, Clostridiales bacterium Firm_04
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.