STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001603005_00594Unannotated protein. (506 aa)    
Predicted Functional Partners:
GCA_001603005_01644
Unannotated protein.
  
 0.999
GCA_001603005_01792
Unannotated protein.
  
 
  0.817
GCA_001603005_00593
Unannotated protein.
       0.678
GCA_001603005_00762
Unannotated protein.
   
 
  0.562
GCA_001603005_00595
Unannotated protein.
  
    0.549
GCA_001603005_02252
Unannotated protein.
   
 
  0.549
GCA_001603005_00592
Unannotated protein.
       0.466
GCA_001603005_01819
Unannotated protein.
       0.459
GCA_001603005_00589
Unannotated protein.
  
    0.440
GCA_001603005_00591
Unannotated protein.
       0.435
Your Current Organism:
Clostridiales bacterium Firm04
NCBI taxonomy Id: 1674842
Other names: C. bacterium Firm_04, Clostridiales bacterium Firm_04
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.