STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001604035_02319Unannotated protein. (917 aa)    
Predicted Functional Partners:
GCA_001604035_01989
Unannotated protein.
    
  0.903
GCA_001604035_00843
Unannotated protein.
    
  0.902
GCA_001604035_01669
Unannotated protein.
   
  0.902
GCA_001604035_01967
Unannotated protein.
    
 0.717
GCA_001604035_01516
Unannotated protein.
 
 
  0.712
GCA_001604035_01970
Unannotated protein.
  
 
 0.712
GCA_001604035_00565
Unannotated protein.
   
 
  0.690
GCA_001604035_01668
Unannotated protein.
   
  0.576
GCA_001604035_01863
Unannotated protein.
  
    0.570
GCA_001604035_00388
Unannotated protein.
  
     0.563
Your Current Organism:
Clostridiales bacterium Firm05
NCBI taxonomy Id: 1674843
Other names: C. bacterium Firm_05, Clostridiales bacterium Firm_05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.