STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001604065_00348Unannotated protein. (353 aa)    
Predicted Functional Partners:
GCA_001604065_00349
Unannotated protein.
 
 0.999
GCA_001604065_01180
Unannotated protein.
  
 0.999
GCA_001604065_00350
Unannotated protein.
 
 0.998
GCA_001604065_00347
Unannotated protein.
 
 
 0.991
GCA_001604065_00704
Unannotated protein.
  
 0.983
GCA_001604065_00659
Unannotated protein.
  
 
 0.922
GCA_001604065_00845
Unannotated protein.
  
 0.916
GCA_001604065_00584
Unannotated protein.
   
 
 0.901
GCA_001604065_00291
Unannotated protein.
   
 
 0.899
GCA_001604065_00971
Unannotated protein.
   
 
 0.894
Your Current Organism:
Clostridiales bacterium Firm09
NCBI taxonomy Id: 1674847
Other names: C. bacterium Firm_09, Clostridiales bacterium Firm_09
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