STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001604065_01125Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_001604065_01008
Unannotated protein.
  
 
 0.966
GCA_001604065_01127
Unannotated protein.
 
     0.860
GCA_001604065_00548
Unannotated protein.
    
 0.797
GCA_001604065_01126
Unannotated protein.
       0.773
GCA_001604065_00063
Unannotated protein.
 
 
 0.771
GCA_001604065_00084
Unannotated protein.
   
 0.657
GCA_001604065_00549
Unannotated protein.
   
 0.657
GCA_001604065_00150
Unannotated protein.
 
0.635
GCA_001604065_00281
Unannotated protein.
   
  0.626
GCA_001604065_00388
Unannotated protein.
  
 0.624
Your Current Organism:
Clostridiales bacterium Firm09
NCBI taxonomy Id: 1674847
Other names: C. bacterium Firm_09, Clostridiales bacterium Firm_09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.