STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001604275_00055Unannotated protein. (399 aa)    
Predicted Functional Partners:
GCA_001604275_02146
Unannotated protein.
 
  
 
0.942
GCA_001604275_01480
Unannotated protein.
 
 0.899
GCA_001604275_00268
Unannotated protein.
 0.894
GCA_001604275_01481
Unannotated protein.
 0.877
GCA_001604275_00737
Unannotated protein.
 
 
 
0.828
GCA_001604275_00265
Unannotated protein.
 
 
 0.814
GCA_001604275_00736
Unannotated protein.
 
 
  0.811
GCA_001604275_00489
Unannotated protein.
 
 0.803
GCA_001604275_00215
Unannotated protein.
 
 
 
  0.800
GCA_001604275_01479
Unannotated protein.
 
 0.798
Your Current Organism:
Spirochaetales bacterium Spiro02
NCBI taxonomy Id: 1674858
Other names: S. bacterium Spiro_02, Spirochaetales bacterium Spiro_02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.