STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001603805_00053Unannotated protein. (184 aa)    
Predicted Functional Partners:
GCA_001603805_01996
Unannotated protein.
   
 0.908
GCA_001603805_02650
Unannotated protein.
  
 0.774
GCA_001603805_01889
Unannotated protein.
    
  0.684
GCA_001603805_01357
Unannotated protein.
  
 
 0.658
GCA_001603805_00052
Unannotated protein.
     0.656
GCA_001603805_00054
Unannotated protein.
 
     0.557
GCA_001603805_01125
Unannotated protein.
  
 0.547
GCA_001603805_00891
Unannotated protein.
    
   0.540
GCA_001603805_00670
Unannotated protein.
  
 
 0.528
GCA_001603805_00938
Unannotated protein.
  
 
 0.528
Your Current Organism:
Deferribacterales bacterium Deferri01
NCBI taxonomy Id: 1674894
Other names: D. bacterium Deferri_01, Deferribacterales bacterium Deferri_01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.