STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001603805_02478Unannotated protein. (344 aa)    
Predicted Functional Partners:
GCA_001603805_02479
Unannotated protein.
    
 0.868
GCA_001603805_02547
Unannotated protein.
 
 0.851
GCA_001603805_02548
Unannotated protein.
 
 0.834
GCA_001603805_02557
Unannotated protein.
 
 
  0.686
GCA_001603805_00257
Unannotated protein.
 
 
 0.663
GCA_001603805_00818
Unannotated protein.
 
 
 0.658
GCA_001603805_00438
Unannotated protein.
    
 0.656
GCA_001603805_02223
Unannotated protein.
  
  
 0.638
GCA_001603805_01487
Unannotated protein.
  
  
 0.631
GCA_001603805_02139
Unannotated protein.
 
 
 0.629
Your Current Organism:
Deferribacterales bacterium Deferri01
NCBI taxonomy Id: 1674894
Other names: D. bacterium Deferri_01, Deferribacterales bacterium Deferri_01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.