STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001604565_00874Unannotated protein. (269 aa)    
Predicted Functional Partners:
GCA_001604565_00463
Unannotated protein.
 
 0.999
GCA_001604565_00610
Unannotated protein.
  
  
 0.930
GCA_001604565_01020
Unannotated protein.
    
 0.828
GCA_001604565_00344
Unannotated protein.
     
 0.827
GCA_001604565_01982
Unannotated protein.
 
 
 0.825
GCA_001604565_00873
Unannotated protein.
       0.774
GCA_001604565_00119
Unannotated protein.
    
 0.684
GCA_001604565_02061
Unannotated protein.
  
  
 0.614
GCA_001604565_00872
Unannotated protein.
       0.594
GCA_001604565_01496
Unannotated protein.
     
 0.585
Your Current Organism:
Puniceicoccales bacterium Verruco01
NCBI taxonomy Id: 1674912
Other names: P. bacterium Verruco_01, Puniceicoccales bacterium Verruco_01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.