STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001604565_01316Unannotated protein. (513 aa)    
Predicted Functional Partners:
GCA_001604565_01541
Unannotated protein.
  
  
 0.610
GCA_001604565_00122
Unannotated protein.
  
    0.603
GCA_001604565_01472
Unannotated protein.
    
  0.598
GCA_001604565_01113
Unannotated protein.
    
  0.556
GCA_001604565_01112
Unannotated protein.
    
  0.548
GCA_001604565_01110
Unannotated protein.
    
  0.546
GCA_001604565_00769
Unannotated protein.
     
 0.545
GCA_001604565_01315
Unannotated protein.
       0.527
GCA_001604565_00528
Unannotated protein.
   
 
  0.503
GCA_001604565_02167
Unannotated protein.
   
 
  0.503
Your Current Organism:
Puniceicoccales bacterium Verruco01
NCBI taxonomy Id: 1674912
Other names: P. bacterium Verruco_01, Puniceicoccales bacterium Verruco_01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.