STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV61821.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
ALV61822.1
DNA double-strand break repair Rad50 ATPase.
       0.715
ALV61818.1
Hypothetical protein.
       0.593
ALV61819.1
Hypothetical protein.
       0.593
ALV61817.1
Dephospho-CoA kinase archaeal, predicted.
       0.581
ALV61815.1
Flavodoxin.
       0.499
ALV61816.1
Hypothetical protein.
       0.499
ALV61823.1
Hypothetical protein.
       0.417
Your Current Organism:
Thermococcus sp. 2319x1
NCBI taxonomy Id: 1674923
Other names: T. sp. 2319x1
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