STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV62959.1Dipeptide transport ATP-binding protein DppD; (TC 3.A.1.5.2). (325 aa)    
Predicted Functional Partners:
ALV62689.1
Dipeptide transport system permease protein DppC; (TC 3.A.1.5.2).
  
 0.982
ALV62958.1
Dipeptide transport system permease protein DppC; (TC 3.A.1.5.2).
 
  
 0.941
ALV62430.1
Mannoside ABC transport system, permease protein 2.
  
 0.934
ALV62960.1
Dipeptide transport ATP-binding protein DppF; (TC 3.A.1.5.2).
 
   
0.872
ALV63565.1
Oligopeptide ABC transporter, permease protein.
  
 0.871
ALV63564.1
Oligopeptide transport system permease protein OppB; (TC 3.A.1.5.1).
 
 
 0.860
ALV62688.1
Dipeptide transport system permease protein DppB; (TC 3.A.1.5.2).
 
 
 0.827
ALV62039.1
Zinc ABC transporter, ATP-binding protein ZnuC.
 
    
0.775
ALV62431.1
Mannoside ABC transport system, permease protein 1.
 
 
 0.733
rnj
Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily.
  
    0.551
Your Current Organism:
Thermococcus sp. 2319x1
NCBI taxonomy Id: 1674923
Other names: T. sp. 2319x1
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