STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512965_00620Unannotated protein. (132 aa)    
Predicted Functional Partners:
GCA_001512965_00619
Unannotated protein.
  
 
 0.985
GCA_001512965_00614
Unannotated protein.
 
 
 0.968
GCA_001512965_00613
Unannotated protein.
 
 
 0.940
GCA_001512965_00624
Unannotated protein.
    
 0.938
GCA_001512965_00621
Unannotated protein.
 
   
 0.909
GCA_001512965_00622
Unannotated protein.
 
   
 0.904
GCA_001512965_00076
Unannotated protein.
 
  
 0.889
GCA_001512965_00618
Unannotated protein.
 
 
 0.884
GCA_001512965_00074
Unannotated protein.
 
  
 0.876
GCA_001512965_00077
Unannotated protein.
    
 0.868
Your Current Organism:
Methanomicrobia archaeon DTU008
NCBI taxonomy Id: 1675034
Other names: M. archaeon DTU008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.