STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512965_01331Unannotated protein. (260 aa)    
Predicted Functional Partners:
GCA_001512965_00609
Unannotated protein.
  
 
 
0.826
GCA_001512965_01443
Unannotated protein.
  
 
 
0.824
GCA_001512965_00843
Unannotated protein.
  
  
 
0.730
GCA_001512965_00533
Unannotated protein.
  
  
 
0.729
GCA_001512965_00817
Unannotated protein.
  
  
  0.685
GCA_001512965_00142
Unannotated protein.
  
  
 
0.595
GCA_001512965_01583
Unannotated protein.
 
  
 
0.583
GCA_001512965_01330
Unannotated protein.
       0.576
GCA_001512965_01332
Unannotated protein.
       0.542
GCA_001512965_00816
Unannotated protein.
  
  
  0.541
Your Current Organism:
Methanomicrobia archaeon DTU008
NCBI taxonomy Id: 1675034
Other names: M. archaeon DTU008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.