STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512965_01508Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_001512965_00920
Unannotated protein.
 
     0.962
GCA_001512965_01507
Unannotated protein.
 
 0.918
GCA_001512965_00552
Unannotated protein.
 
 0.783
GCA_001512965_00775
Unannotated protein.
   
 0.758
GCA_001512965_01811
Unannotated protein.
   
 0.758
GCA_001512965_00534
Unannotated protein.
    
  0.645
GCA_001512965_00535
Unannotated protein.
    
  0.645
GCA_001512965_00544
Unannotated protein.
     
 0.633
GCA_001512965_01506
Unannotated protein.
 
  
 
0.607
GCA_001512965_00219
Unannotated protein.
 
 0.585
Your Current Organism:
Methanomicrobia archaeon DTU008
NCBI taxonomy Id: 1675034
Other names: M. archaeon DTU008
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.