STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512965_01652Unannotated protein. (80 aa)    
Predicted Functional Partners:
GCA_001512965_00304
Unannotated protein.
  
 
 0.913
GCA_001512965_00459
Unannotated protein.
  
 0.879
GCA_001512965_01718
Unannotated protein.
    
 0.843
GCA_001512965_01469
Unannotated protein.
   
 
 0.771
GCA_001512965_00657
Unannotated protein.
   
 
 0.758
GCA_001512965_00985
Unannotated protein.
  
 
 0.748
GCA_001512965_01467
Unannotated protein.
   
 0.743
GCA_001512965_01581
Unannotated protein.
   
 0.743
GCA_001512965_01653
Unannotated protein.
       0.743
GCA_001512965_00118
Unannotated protein.
  
 
 0.742
Your Current Organism:
Methanomicrobia archaeon DTU008
NCBI taxonomy Id: 1675034
Other names: M. archaeon DTU008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.