Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trxBThioredoxin reductase. (318 aa)    
Predicted Functional Partners:
trxB-2
Thioredoxin reductase.
 
0.969
ndh-2
NADH dehydrogenase, FAD-containing subunit.
    
 0.935
csdB
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 
  0.903
fdx-3
Ferredoxin.
   
 
 0.898
trxA-4
Thioredoxin family protein; Belongs to the thioredoxin family.
 
 
 0.748
ahpC
Peroxiredoxin, AhpC/TSA family.
  
 
 0.740
petF
Ferredoxin, PetF.
   
 
 0.582
thiF
Dinucleotide-utilizing enzyme; Involved in molybdopterin and thiamine biosynthesis.
  
  
 0.531
aarF
Predicted protein kinase.
       0.498
Pro_0297
Uncharacterized conserved membrane protein.
  
    0.474
Your Current Organism:
Prochlorococcus marinus CCMP1375
NCBI taxonomy Id: 167539
Other names: P. marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus SS120, Prochlorococcus marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus subsp. marinus str. SS120
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