Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Pro_0807Uncharacterized protein; Conserved in cyanobacteria. (85 aa)    
Predicted Functional Partners:
Pro_0138
TPR-repeat protein, specific for cyanobacteria.
  
     0.764
Pro_1884
Uncharacterized membrane protein; Conserved in cyanobacteria.
  
     0.749
Pro_0911
Uncharacterized protein; Conserved in cyanobacteria.
  
     0.743
Pro_0428
Uncharacterized Zn ribbon-containing conserved protein.
  
     0.740
Pro_0866
Uncharacterized protein; Conserved in cyanobacteria.
  
     0.738
Pro_0129
Uncharacterized protein; Conserved in cyanobacteria.
  
     0.735
Pro_0524
XisA-like site specific recombinase from phage integrase family.
  
     0.720
Pro_1122
Oligoketide cyclase family enzyme; Related to COG2867.
  
     0.719
arnT
Glycosyltransferase of PMT family.
  
     0.717
Pro_0300
Uncharacterized protein; Conserved in cyanobacteria.
  
     0.702
Your Current Organism:
Prochlorococcus marinus CCMP1375
NCBI taxonomy Id: 167539
Other names: P. marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus SS120, Prochlorococcus marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus subsp. marinus str. SS120
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