STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloB-3Metallo-beta-lactamase superfamily hydrolase. (300 aa)    
Predicted Functional Partners:
Pro_1463
SAM-dependent methyltransferase.
       0.773
Pro_0249
Uncharacterized conserved membrane protein.
  
     0.711
Pro_0512
Uncharacterized membrane protein; Conserved in cyanobacteria.
  
     0.603
cccA
Cytochrome C.
  
     0.571
Pro_0161
Uncharacterized conserved protein.
  
    0.541
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.528
Pro_1464
Predicted protein family PM-26.
       0.513
thiF
Dinucleotide-utilizing enzyme; Involved in molybdopterin and thiamine biosynthesis.
  
 
 0.510
trxB-2
Thioredoxin reductase.
     
 0.495
ybeY
Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
 
 
 0.478
Your Current Organism:
Prochlorococcus marinus CCMP1375
NCBI taxonomy Id: 167539
Other names: P. marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus SS120, Prochlorococcus marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus subsp. marinus str. SS120
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.