STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gph-2Predicted HAD superfamily phosphatase. (261 aa)    
Predicted Functional Partners:
Pro_1593
Uncharacterized protein; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
 
     0.701
Pro_0866
Uncharacterized protein; Conserved in cyanobacteria.
  
     0.691
Pro_1074
Uncharacterized membrane protein; Conserved in cyanobacteria.
  
     0.681
Pro_0815
B-12 Dependent Ribonucleotide Reductase.
  
     0.670
Pro_0896
Uncharacterized membrane protein; Conserved in cyanobacteria.
  
     0.639
hli5
High light inducible protein hli5; HLIP.
  
     0.632
Pro_0300
Uncharacterized protein; Conserved in cyanobacteria.
  
     0.630
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
    0.625
Pro_0669
Uncharacterized membrane protein; Conserved in cyanobacteria.
  
    0.611
Pro_0129
Uncharacterized protein; Conserved in cyanobacteria.
  
     0.597
Your Current Organism:
Prochlorococcus marinus CCMP1375
NCBI taxonomy Id: 167539
Other names: P. marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus SS120, Prochlorococcus marinus subsp. marinus str. CCMP1375, Prochlorococcus marinus subsp. marinus str. SS120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.