node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pro_1648 | infB | Pro_1648 | Pro_1649 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.937 |
Pro_1648 | nusA | Pro_1648 | Pro_1647 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.969 |
Pro_1648 | pnp-2 | Pro_1648 | Pro_1307 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Ribonuclease PH; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.466 |
Pro_1648 | rimP | Pro_1648 | Pro_1646 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Uncharacterized YhbC family conserved protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.959 |
Pro_1648 | rplD | Pro_1648 | Pro_1711 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.478 |
Pro_1648 | rplU | Pro_1648 | Pro_1425 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.493 |
Pro_1648 | rplW | Pro_1648 | Pro_1710 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.570 |
Pro_1648 | rpsK | Pro_1648 | Pro_1690 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.558 |
Pro_1648 | rpsL | Pro_1648 | Pro_1667 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.569 |
Pro_1648 | uppS | Pro_1648 | Pro_1103 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.476 |
infB | Pro_1648 | Pro_1649 | Pro_1648 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Predicted nucleic-acid-binding protein implicated in transcription termination. | 0.937 |
infB | nusA | Pro_1649 | Pro_1647 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.989 |
infB | pnp-2 | Pro_1649 | Pro_1307 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribonuclease PH; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.904 |
infB | rimP | Pro_1649 | Pro_1646 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Uncharacterized YhbC family conserved protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.891 |
infB | rplD | Pro_1649 | Pro_1711 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.991 |
infB | rplU | Pro_1649 | Pro_1425 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.854 |
infB | rplW | Pro_1649 | Pro_1710 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.977 |
infB | rpsK | Pro_1649 | Pro_1690 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.990 |
infB | rpsL | Pro_1649 | Pro_1667 | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.967 |
nusA | Pro_1648 | Pro_1647 | Pro_1648 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | Predicted nucleic-acid-binding protein implicated in transcription termination. | 0.969 |