STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM71347.1Conserved hypothetical protein in cyanobacteria; Belongs to the UPF0367 family. (89 aa)    
Predicted Functional Partners:
ABM71348.1
Possible ABC transporter, ATP-binding component; COG1122 ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism].
       0.828
ABM71491.1
Conserved hypothetical protein.
  
     0.774
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.774
ndhO
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.773
ABM71714.1
Conserved hypothetical protein.
  
     0.773
ABM71847.1
Conserved hypothetical protein.
  
     0.773
ABM72243.1
Conserved hypothetical protein.
  
     0.773
ABM72957.1
Conserved hypothetical protein.
  
     0.773
ABM71664.1
Conserved hypothetical protein.
  
     0.772
ABM72106.1
Conserved hypothetical protein.
  
     0.772
Your Current Organism:
Prochlorococcus marinus MIT9515
NCBI taxonomy Id: 167542
Other names: P. marinus str. MIT 9515, Prochlorococcus marinus str. MIT 9515
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