STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM71752.1Conserved hypothetical protein. (170 aa)    
Predicted Functional Partners:
ABM72428.1
COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only].
  
 
 0.795
pta
COG857 BioD-like N-terminal domain of phosphotransacetylase [General function prediction only].
       0.764
ABM72564.1
Conserved hypothetical protein.
  
     0.758
rub
COG1773 Rubredoxin [Energy production and conversion].
  
     0.737
ABM71962.1
Conserved hypothetical protein.
  
     0.725
ABM71279.1
Hypothetical protein.
 
     0.717
ABM71322.1
COG4243 Predicted membrane protein [Function unknown].
  
   
 0.709
ABM71802.1
Conserved hypothetical protein.
  
     0.709
ABM72234.1
Conserved hypothetical protein.
  
     0.707
psaD
Photosystem I protein PsaD.
  
     0.693
Your Current Organism:
Prochlorococcus marinus MIT9515
NCBI taxonomy Id: 167542
Other names: P. marinus str. MIT 9515, Prochlorococcus marinus str. MIT 9515
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.