STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM72276.1Conserved hypothetical protein. (386 aa)    
Predicted Functional Partners:
ABM71863.1
Conserved hypothetical protein.
  
     0.763
ABM71995.1
Conserved hypothetical protein.
  
     0.760
ABM72277.1
Possible Paired amphipathic helix repeat.
       0.752
ABM72655.1
Conserved hypothetical protein.
  
     0.747
ABM72345.1
COG4188 Predicted dienelactone hydrolase [General function prediction only].
  
     0.746
ABM71874.1
Conserved hypothetical protein.
  
     0.745
ABM71496.1
Conserved hypothetical protein.
  
     0.726
ABM71771.1
Conserved hypothetical protein.
  
     0.724
ABM71946.1
Conserved hypothetical protein.
  
     0.718
ABM72393.1
Conserved hypothetical protein.
  
     0.706
Your Current Organism:
Prochlorococcus marinus MIT9515
NCBI taxonomy Id: 167542
Other names: P. marinus str. MIT 9515, Prochlorococcus marinus str. MIT 9515
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.