STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABM72740.1COG4333 Uncharacterized protein conserved in bacteria [Function unknown]. (177 aa)    
Predicted Functional Partners:
ABM72741.1
COG3556 Predicted membrane protein [Function unknown].
       0.828
ABM72742.1
COG2203 FOG: GAF domain [Signal transduction mechanisms].
       0.649
ABM72739.1
Conserved hypothetical protein.
       0.625
ABM71544.1
Selenide,water dikinase; COG1252 NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].
  
     0.550
ABM71518.1
Aminomethyltransferase GcvT-like protein; COG354 Predicted aminomethyltransferase related to GcvT [General function prediction only].
  
     0.537
ABM72431.1
Hypothetical protein; COG5470 Uncharacterized conserved protein [Function unknown].
  
     0.535
met3
ATP-sulfurylase; COG2046 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism].
  
     0.484
ABM71886.1
COG4121 Uncharacterized conserved protein [Function unknown].
  
     0.460
ABM71703.1
Conserved hypothetical protein.
  
     0.438
ABM72738.1
DUF209; COG1741 Pirin-related protein [General function prediction only]; Belongs to the pirin family.
       0.437
Your Current Organism:
Prochlorococcus marinus MIT9515
NCBI taxonomy Id: 167542
Other names: P. marinus str. MIT 9515, Prochlorococcus marinus str. MIT 9515
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.