STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO17250.1ABC transporter, substrate binding protein, possibly Mn; COG803 ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]; Belongs to the bacterial solute-binding protein 9 family. (302 aa)    
Predicted Functional Partners:
ABO17252.1
COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].
 
 0.998
ABO17251.1
ABC transporter, ATP binding domain, possibly Mn transporter; COG1121 ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].
 
 
 0.996
ABO17754.1
COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].
 
  
 0.900
ABO17756.1
COG1121 ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].
 
  
 0.811
ABO17249.1
Conserved hypothetical protein.
       0.807
ABO17253.1
Conserved hypothetical protein.
       0.803
lraI
ABC transporter, substrate binding protein, possibly Mn; COG803 ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism].
  
     0.735
thrS
Threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
       0.626
trpS
Tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.626
ABO17248.1
Conserved hypothetical protein.
       0.626
Your Current Organism:
Prochlorococcus marinus MIT9301
NCBI taxonomy Id: 167546
Other names: P. marinus str. MIT 9301, Prochlorococcus marinus str. MIT 9301
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