STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU98_0224Ubiquinone biosynthesis monooxygenase UbiB; Alternative locus ID: PMIT9314_1576. (551 aa)    
Predicted Functional Partners:
EU98_0225
Lysine decarboxylase; Alternative locus ID: PMIT9314_1577.
       0.667
EU98_0226
Phosphatidate cytidylyltransferase; Alternative locus ID: PMIT9314_1578; Belongs to the CDS family.
       0.622
EU98_0223
Putative helix-turn-helix protein; Alternative locus ID: PMIT9314_1575.
       0.614
EU98_0491
SAM-dependent methyltransferase; Alternative locus ID: PMIT9314_1183.
    
 0.504
EU98_1060
Mg-protoporphyrin O-methyltransferase; Alternative locus ID: PMIT9314_1259.
    
 0.504
EU98_1699
SAM-dependent methyltransferase; Alternative locus ID: PMIT9314_0165.
    
 0.504
EU98_1792
TPR repeat; Alternative locus ID: PMIT9314_0258.
    
 0.504
EU98_1812
Hypothetical protein; Alternative locus ID: PMIT9314_0278.
    
 0.504
EU98_1837
Putative methyltransferase; Alternative locus ID: PMIT9314_0303.
    
 0.504
EU98_1501
Chloride channel protein; Alternative locus ID: PMIT9314_0699.
     
 0.466
Your Current Organism:
Prochlorococcus marinus MIT9314
NCBI taxonomy Id: 167548
Other names: P. marinus str. MIT 9314, Prochlorococcus marinus str. MIT 9314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.