STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU98_0418Putative potassium channel; Alternative locus ID: PMIT9314_1110; VIC family. (351 aa)    
Predicted Functional Partners:
EU98_1146
Potassium uptake protein TrkH; Alternative locus ID: PMIT9314_1345.
 
 0.964
EU98_0417
Cytochrome C553 (soluble cytochrome f); Alternative locus ID: PMIT9314_1109.
       0.725
EU98_0416
Hypothetical protein; Alternative locus ID: PMIT9314_1108.
       0.722
EU98_0908
Molybdopterin binding motif; Alternative locus ID: PMIT9314_0958; CinA N-terminal domain; C-terminal domain of CinA type S; Belongs to the CinA family.
    
 0.648
EU98_0415
Phosphate ABC transporter; Alternative locus ID: PMIT9314_1107; periplasmic phosphate-binding protein PstS; TCDB 3.A.1.7.1.
       0.634
EU98_1501
Chloride channel protein; Alternative locus ID: PMIT9314_0699.
  
  
 0.618
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.597
EU98_0413
Phosphate transport system permease protein PstA; Alternative locus ID: PMIT9314_1105; TCDB 3.A.1.7.1.
     
 0.501
EU98_0419
Hypothetical protein; Alternative locus ID: PMIT9314_1111; FIG00940636: hypothetical protein.
       0.493
EU98_0414
Phosphate transport system permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.477
Your Current Organism:
Prochlorococcus marinus MIT9314
NCBI taxonomy Id: 167548
Other names: P. marinus str. MIT 9314, Prochlorococcus marinus str. MIT 9314
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