STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU98_1237Hypothetical protein; Alternative locus ID: PMIT9314_1694; Hypothetical protein of L-Asparaginase type 2-like. (321 aa)    
Predicted Functional Partners:
EU98_1234
Hypothetical protein; Alternative locus ID: PMIT9314_1691; FIG017608: hypothetical membrane protein; specific for cyanobacteria.
 
     0.840
EU98_1236
Putative membrane protein Ycf36; Alternative locus ID: PMIT9314_1693.
       0.824
rsfS
Iojap protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.819
carB
Carbamoyl-phosphate synthase large chain; Alternative locus ID: PMIT9314_1690; Belongs to the CarB family.
       0.581
Your Current Organism:
Prochlorococcus marinus MIT9314
NCBI taxonomy Id: 167548
Other names: P. marinus str. MIT 9314, Prochlorococcus marinus str. MIT 9314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.