STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU98_1357HAD hydrolase; Alternative locus ID: PMIT9314_0554. (258 aa)    
Predicted Functional Partners:
EU98_1969
Hypothetical protein; Alternative locus ID: PMIT9314_0435; FIG00941837: hypothetical protein.
  
  
  0.698
EU98_1356
Light dependent period modulator LdpA; Alternative locus ID: PMIT9314_0553.
 
     0.697
ndhN
Putative subunit of NAD(P)H:quinone oxidoreductase; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
 
     0.658
EU98_1761
Hypothetical protein; Alternative locus ID: PMIT9314_0227.
  
     0.650
EU98_0908
Molybdopterin binding motif; Alternative locus ID: PMIT9314_0958; CinA N-terminal domain; C-terminal domain of CinA type S; Belongs to the CinA family.
    
  0.626
EU98_0963
Hypothetical protein; Alternative locus ID: PMIT9314_1876; FIG00941755: hypothetical protein.
  
     0.620
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.607
EU98_0010
Hypothetical protein; Alternative locus ID: PMIT9314_1363; Cyanobacterial protein slr0575.
  
     0.595
EU98_0911
Repeats containing protein; Alternative locus ID: PMIT9314_0961.
  
     0.582
EU98_0328
CheY-like domain containing protein; Alternative locus ID: PMIT9314_1020.
  
     0.573
Your Current Organism:
Prochlorococcus marinus MIT9314
NCBI taxonomy Id: 167548
Other names: P. marinus str. MIT 9314, Prochlorococcus marinus str. MIT 9314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.