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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU98_1925Ferric iron ABC transporter; Alternative locus ID: PMIT9314_0391; iron-binding protein. (340 aa)    
Predicted Functional Partners:
EU98_0676
Ferric iron ABC transporter; Alternative locus ID: PMIT9314_0726; permease protein.
 
 
 0.997
EU98_0320
ABC transporter; Alternative locus ID: PMIT9314_1012; ATP binding component, possibly iron transporter; Belongs to the ABC transporter superfamily.
 
 
 0.987
EU98_1924
Iron-uptake factor PiuC; Alternative locus ID: PMIT9314_0390.
 
    0.701
EU98_0718
ABC-type multidrug transport system; Alternative locus ID: PMIT9314_0768; ATPase component.
    
 0.662
EU98_1923
Putative Peptidase family M20/M25/M40; Alternative locus ID: PMIT9314_0389.
       0.561
EU98_1926
Hypothetical protein; Alternative locus ID: PMIT9314_0392.
       0.417
EU98_1082
RuBisCO operon transcriptional regulator; Alternative locus ID: PMIT9314_1281; Belongs to the LysR transcriptional regulatory family.
     
 0.408
Your Current Organism:
Prochlorococcus marinus MIT9314
NCBI taxonomy Id: 167548
Other names: P. marinus str. MIT 9314, Prochlorococcus marinus str. MIT 9314
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