STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU98_2000Hypothetical protein; Alternative locus ID: PMIT9314_0466; FIG00940651: hypothetical protein; Belongs to the SOS response-associated peptidase family. (212 aa)    
Predicted Functional Partners:
EU98_2001
Hypothetical protein; Alternative locus ID: PMIT9314_0467; FIG00941987: hypothetical protein.
       0.731
EU98_1999
Hypothetical protein; Alternative locus ID: PMIT9314_0465; FIG00942017: hypothetical protein.
       0.581
EU98_2002
Ribosomal large subunit pseudouridine synthase F; Alternative locus ID: PMIT9314_0468; Belongs to the pseudouridine synthase RsuA family.
       0.535
Your Current Organism:
Prochlorococcus marinus MIT9314
NCBI taxonomy Id: 167548
Other names: P. marinus str. MIT 9314, Prochlorococcus marinus str. MIT 9314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.