STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV00_1069GTP-binding protein Era; Alternative locus ID: PMIT9322_0891. (304 aa)    
Predicted Functional Partners:
EV00_1065
SSU ribosomal protein S16p; Alternative locus ID: PMIT9322_0887.
    
 0.992
EV00_0319
SSU ribosomal protein S7p (S5e); Alternative locus ID: PMIT9322_1671.
    
 0.990
EV00_0298
SSU ribosomal protein S9p (S16e); Alternative locus ID: PMIT9322_1650.
    
 0.988
EV00_0322
SSU ribosomal protein S10p (S20e); Alternative locus ID: PMIT9322_1674.
    
 0.984
EV00_1442
SSU ribosomal protein S15p (S13e); Alternative locus ID: PMIT9322_0126.
   
 0.982
EV00_0286
SSU ribosomal protein S5p (S2e); Alternative locus ID: PMIT9322_1638.
    
 0.981
EV00_0318
SSU ribosomal protein S12p (S23e); Alternative locus ID: PMIT9322_1670.
    
 0.979
EV00_1153
SSU ribosomal protein S14p (S29e); Alternative locus ID: PMIT9322_0975.
    
 0.979
EV00_1545
SSU ribosomal protein S2p (SAe); Alternative locus ID: PMIT9322_0229.
   
  0.979
EV00_0422
Nucleoside diphosphate kinase; Alternative locus ID: PMIT9322_1191.
   
  0.972
Your Current Organism:
Prochlorococcus marinus MIT9322
NCBI taxonomy Id: 167550
Other names: P. marinus str. MIT 9322, Prochlorococcus marinus str. MIT 9322
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.