STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV00_1739Hypothetical protein; Alternative locus ID: PMIT9322_0423; FIG00940057: hypothetical protein. (88 aa)    
Predicted Functional Partners:
EV00_1740
Alpha/beta hydrolase; Alternative locus ID: PMIT9322_0424.
       0.824
EV00_1738
Hypothetical protein; Alternative locus ID: PMIT9322_0422; FIG00941167: hypothetical protein.
       0.710
EV00_1741
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Alternative locus ID: PMIT9322_0425.
       0.699
EV00_1737
Hypothetical protein; Alternative locus ID: PMIT9322_0421; Alr2762 protein.
       0.685
EV00_1742
Uroporphyrinogen III decarboxylase; Alternative locus ID: PMIT9322_0426.
       0.515
EV00_1743
Nucleoside-diphosphate-sugar epimerase; Alternative locus ID: PMIT9322_0427.
       0.510
EV00_1736
Hypothetical protein; Alternative locus ID: PMIT9322_0420; Protein of unknown function DUF490.
       0.479
EV00_1744
Plastocyanin; Alternative locus ID: PMIT9322_0428.
       0.445
Your Current Organism:
Prochlorococcus marinus MIT9322
NCBI taxonomy Id: 167550
Other names: P. marinus str. MIT 9322, Prochlorococcus marinus str. MIT 9322
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