STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV00_1892DNA topoisomerase I; Alternative locus ID: PMIT9322_0576. (868 aa)    
Predicted Functional Partners:
EV00_0266
RecA protein; Alternative locus ID: PMIT9322_1618.
   
 0.922
EV00_0691
ATP-dependent DNA helicase UvrD/PcrA; Alternative locus ID: PMIT9322_1460.
 
 
 
 0.887
EV00_1218
DNA polymerasee I; Alternative locus ID: PMIT9322_1040.
 
 0.875
EV00_1632
Putative transcripton factor; Alternative locus ID: PMIT9322_0316.
   
 0.863
EV00_1891
Hypothetical protein; Alternative locus ID: PMIT9322_0575; FIG00940380: hypothetical protein.
       0.851
EV00_1385
Leucyl-tRNA synthetase; Alternative locus ID: PMIT9322_0069.
   
 
 0.849
EV00_1890
Hypothetical protein; Alternative locus ID: PMIT9322_0574; FIG00940675: hypothetical protein.
       0.827
EV00_1888
Periplasmic binding protein-like II; Alternative locus ID: PMIT9322_0572.
     
 0.826
EV00_1889
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Alternative locus ID: PMIT9322_0573.
       0.817
EV00_0317
Ferredoxin-dependent glutamate synthase; Alternative locus ID: PMIT9322_1669.
  
  
 0.788
Your Current Organism:
Prochlorococcus marinus MIT9322
NCBI taxonomy Id: 167550
Other names: P. marinus str. MIT 9322, Prochlorococcus marinus str. MIT 9322
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.